Publications

 

mRNA localization is linked to translation regulation in the Caenorhabditis elegans germ lineage
Parker DM, Winkenbach LP, Boyson S, Saxton MN, Daidone C, Al-Mazaydeh ZA, Nishimura MT, Mueller F, Osborne Nishimura E.
Development (2020) Jul 8;147(13):dev186817. doi: 10.1242/dev.186817.

 

 


YTHDF2 destabilizes m6A-modified neural-specific RNAs to restrain differentiation in induced pluripotent stem cells
Heck AM, Russo J, Wilusz J, Nishimura EO, Wilusz CJ.
RNA (2020) Jun;26(6):739-755. doi: 10.1261/rna.073502.119. 


Widespread roles for piRNAs and WAGO-class siRNAs in shaping the germline transcriptome of Caenorhabditis elegans
Reed KJ, Svendsen JM, Brown KC, Montgomery BE, Marks TN, Vijayasarathy T, Parker DM, Nishimura EO, Updike DL, Montgomery TA.
Nucleic Acids Res (2020) Feb 28;48(4):1811-1827. doi: 10.1093/nar/gkz1178.


TIR domains of plant immune receptors are NAD+-cleaving enzymes that promote cell death
Wan L, Essuman K, Anderson RG, Sasaki Y, Monteiro F, Chung EH, Osborne Nishimura E, DiAntonio A, Milbrandt J, Dangl JL, Nishimura MT
Science. (2019) 23 Aug; 365, 6455, p799-803.

 


A Strategy To Isolate Modifiers of Caenorhabditis elegans Lethal Mutations: Investigating the Endoderm Specifying Ability of the Intestinal Differentiation GATA Factor ELT-2
Wiesenfahrt T, Duanmu J, Snider F, Moerman D, Au V, Li-Leger E, Flibotte S, Parker DM, Marshall CJ, Nishimura E, Mains PE, and McGhee JD.
G3 (2018) May 4; 8(5):1425-1437. doi: 10.1534/g3.118.200079.


Quantitating transcription factor redundancy: The relative roles of the ELT-2 and ELT-7 GATA factors in the C. elegans endoderm
Dineen A¹ and Osborne Nishimura E¹, Goszczynski B, Rothman JH, McGhee JD.
Dev Biol (2018) Jan 29. pii: S0012-1606(17)30690-5.
¹Authors contributed equally.


TIR-only protein RBA1 recognizes a pathogen effector to regulate cell death in Arabidopsis
Nishimura MT, Anderson RG, Cherkis KA, Law TF, Liu QL, Machius M, Nimchuk ZL, Yang L, Chung EH, El Kasmi F, Hyunh M, Osborne Nishimura E, Sondek JE, Dangl JL.
Proc Natl Acad Sci (2017) Mar 7;114(10):E2053-E2062.


Polar Positioning of Phase-Separated Liquid Compartments in Cells Regulated by an mRNA Competition Mechanism
Saha S, Weber CA, Nousch M, Adame-Arana O, Hoege C, Hein MY, Osborne-Nishimura E, Mahamid J, Jahnel M, Jawerth L, Pozniakovski A, Eckmann CR, Jülicher F, Hyman AA.
Cell (2016) Sep 8;166(6):1572-1584.e16.


Probing and rearranging the transcription factor network controlling the C. elegans endoderm
Wiesenfahrt T, Osborne Nishimura E, Berg JY, McGhee JD.
Worm (2016) June 10; e1198869


A Transcriptional Lineage of the Early C. elegans Embryo
Tintori SC, Osborne Nishimura E, Golden P, Lieb JD, Goldstein B.
Dev Cell (2016) Aug 22;38(4):430-44.


The function and regulation of the GATA factor ELT-2 in the C. elegans endoderm
Wiesenfahrt T, Berg JY, Osborne Nishimura E, Robinson AG, Goszczynski B, Lieb JD, McGhee JD.
Development (2016) Feb 1;143(3):483-91.


Asymmetric Transcript Discovery by RNA-seq in C. elegans Blastomeres Identifies neg-1, a Gene Important for Anterior Morphogenesis
Osborne Nishimura E , Zhang JC, Werts AD, Goldstein B, Lieb JD.
PLoS Genetics (2015) Apr 13;11(4):e1005117.


For more publications see Erin's page